PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.C00781.1.p
Common NameEUGRSUZ_C00781, LOC104438998
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 178aa    MW: 18418.5 Da    PI: 8.6513
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.C00781.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-202979256
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      +ykGVr +k +g+WvAeIr p++   r r++lg++ taeeAa+a++aa ++l+g+
  Eucgr.C00781.1.p 29 RYKGVRMRK-WGKWVAEIRQPNS---RDRIWLGSYATAEEAARAYDAAVLCLRGP 79
                      7******99.**********933...5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.5E-142978IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-232987IPR016177DNA-binding domain
SMARTSM003803.4E-372992IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-312987IPR001471AP2/ERF domain
PROSITE profilePS5103223.3672986IPR001471AP2/ERF domain
CDDcd000181.02E-282988No hitNo description
PRINTSPR003671.2E-93041IPR001471AP2/ERF domain
PRINTSPR003671.2E-95268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MARRGGAKEA NGGSEAPDAV LPRAHHRHRY KGVRMRKWGK WVAEIRQPNS RDRIWLGSYA  60
TAEEAARAYD AAVLCLRGPT ALLNFPDLPP EIPPSAAAGG GGVSASQVQM AAARHAHGRR  120
AATAAETSTC SGGEPCGSSS PDVLQIAANS SGGGEDISRF ATDGCYLGTE HGVQVNS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1629861472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.C00781.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010050434.21e-125PREDICTED: ethylene-responsive transcription factor RAP2-9
SwissprotQ9C5916e-34ERF16_ARATH; Ethylene-responsive transcription factor ERF016
TrEMBLA0A059CLV61e-125A0A059CLV6_EUCGR; Uncharacterized protein
STRINGXP_010050434.11e-126(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.12e-23ERF family protein