PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.C00348.4.p
Common NameEUGRSUZ_C00348
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 321aa    MW: 34589.8 Da    PI: 5.3587
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.C00348.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.47e-24175230359
                       -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       DgynWrKYGqK+vk+ + +rsY+rCt ++C++kk +e+s+   +++e++Y+++Hnh+
  Eucgr.C00348.4.p 175 DGYNWRKYGQKQVKSPKGSRSYFRCTNSDCSAKK-IECSDLLSQTTETVYRSSHNHD 230
                       9*******************************98.*********************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.844168232IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.9E-19170232IPR003657WRKY domain
SMARTSM007746.5E-22173231IPR003657WRKY domain
SuperFamilySSF1182904.32E-18174232IPR003657WRKY domain
PfamPF031068.3E-18175230IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MEDRGSDTSD ALQTDDETTE ESESESEEER LRDLQEFRVA RLGEPRGPPL AAAAGGGGGR  60
LEATSLCAGG SHVISASREE PEERANQLNG ELGSDITGEA AETYSRNPRT VCPSISSGLL  120
LVSVSQSISS VASSTPLDRK LPPTTKVTDS CTVRSKVRNS SDCGTTSAVK ASGGDGYNWR  180
KYGQKQVKSP KGSRSYFRCT NSDCSAKKIE CSDLLSQTTE TVYRSSHNHD PPQKVRDGRQ  240
RSRVKSSRII VESEVAKHPV RMLPESDPSV ASREQKNELP SSVPGREIQE ANGFDANYGI  300
VAKQGNDNDP ELKPRQGEEK *
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.C00348.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010047108.10.0PREDICTED: probable WRKY transcription factor 32
TrEMBLA0A059CLV90.0A0A059CLV9_EUCGR; Uncharacterized protein
STRINGXP_010047108.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-24WRKY DNA-binding protein 32