PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.C00348.1.p
Common NameEUGRSUZ_C00348, LOC104436089
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 487aa    MW: 52523.3 Da    PI: 8.7825
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.C00348.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.51.3e-23175230359
                       -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       DgynWrKYGqK+vk+ + +rsY+rCt ++C++kk +e+s+   +++e++Y+++Hnh+
  Eucgr.C00348.1.p 175 DGYNWRKYGQKQVKSPKGSRSYFRCTNSDCSAKK-IECSDLLSQTTETVYRSSHNHD 230
                       9*******************************98.*********************7 PP
2WRKY98.34.9e-31348405259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k+ve++ ++ ++v+itY+g H+h+
  Eucgr.C00348.1.p 348 ADGYRWRKYGQKMVKGNPYPRNYYRCTSAGCPVRKQVETALDNASAVTITYKGIHDHD 405
                       6********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.844168232IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.9E-19171232IPR003657WRKY domain
SMARTSM007746.5E-22173231IPR003657WRKY domain
SuperFamilySSF1182908.11E-18174232IPR003657WRKY domain
PfamPF031061.5E-17175230IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.4E-32332407IPR003657WRKY domain
PROSITE profilePS5081130.572342407IPR003657WRKY domain
SuperFamilySSF1182904.97E-27343407IPR003657WRKY domain
SMARTSM007741.1E-35347406IPR003657WRKY domain
PfamPF031062.7E-24349404IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MEDRGSDTSD ALQTDDETTE ESESESEEER LRDLQEFRVA RLGEPRGPPL AAAAGGGGGR  60
LEATSLCAGG SHVISASREE PEERANQLNG ELGSDITGEA AETYSRNPRT VCPSISSGLL  120
LVSVSQSISS VASSTPLDRK LPPTTKVTDS CTVRSKVRNS SDCGTTSAVK ASGGDGYNWR  180
KYGQKQVKSP KGSRSYFRCT NSDCSAKKIE CSDLLSQTTE TVYRSSHNHD PPQKVRDGRQ  240
RSRVKSSRII VESEVAKHPV RMLPESDPSV ASREQKNELP SSVPGREIQE ANGFDANYGI  300
VAKQGNDNDP ELKPRGKKNR LIRSSSPLKP GKKPKFVVHA AGDVGISADG YRWRKYGQKM  360
VKGNPYPRNY YRCTSAGCPV RKQVETALDN ASAVTITYKG IHDHDRPVPK KRNGPPSVPL  420
IAAASSDSLH STPIKKSDGL RDHTSPTQCS VDSEGELSSQ ALDLGGEKAI ESARTLLSIG  480
FEIKPR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-23335407274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.C00348.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010047108.10.0PREDICTED: probable WRKY transcription factor 32
SwissprotP595831e-102WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A059CKD40.0A0A059CKD4_EUCGR; Uncharacterized protein
STRINGXP_010047108.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM63382844
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-97WRKY DNA-binding protein 32