PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Eucgr.B03921.1.p | ||||||||
Common Name | EUGRSUZ_B03921 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
||||||||
Family | GeBP | ||||||||
Protein Properties | Length: 259aa MW: 29032.9 Da PI: 10.3456 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 49.1 | 1.6e-15 | 41 | 125 | 3 | 98 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 + +l+seeDei lL+ l + ++ p++d + ++ks+ ++ q+ +KirrL++K++++ ++ + ++++hd+k+fel++ + Eucgr.B03921.1.p 41 PDKLFSEEDEIRLLKSLSKLTN-----PTADP-PTLDRIEKSLGPSLTRAQIANKIRRLRHKYHRQART-----KALIRTPHDRKVFELARDV 122 6789*************99955.....55554.45689**************************99998.....7899*************** PP DUF573 96 Wgs 98 Wg+ Eucgr.B03921.1.p 123 WGK 125 *95 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.7E-15 | 43 | 124 | IPR007592 | Protein of unknown function DUF573 |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0005730 | Cellular Component | nucleolus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0009507 | Cellular Component | chloroplast | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 259 aa Download sequence Send to blast |
MSTAVELRMS PRLRSRASSS PASAQSSDHR PPAGEQQNPR PDKLFSEEDE IRLLKSLSKL 60 TNPTADPPTL DRIEKSLGPS LTRAQIANKI RRLRHKYHRQ ARTKALIRTP HDRKVFELAR 120 DVWGKRPSSR KERKERKGKE EKKQQANLEE EREKDEGEIL GGEEESGGVV AAAAVAVADL 180 GSFPALVEEC ERCFPGNGVW REGLKRLEEG RLRKVNERVV WLRMEEATLM AKKAELTQDL 240 TRMILDSVAP SSSQAPTA* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 129 | 143 | RKERKERKGKEEKKQ |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Eucgr.B03921.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010045293.1 | 0.0 | PREDICTED: uncharacterized protein LOC104434041 | ||||
TrEMBL | A0A059DA76 | 0.0 | A0A059DA76_EUCGR; Uncharacterized protein | ||||
STRING | XP_010045293.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM17149 | 8 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61730.1 | 7e-10 | DNA-binding storekeeper protein-related transcriptional regulator |
Link Out ? help Back to Top | |
---|---|
Phytozome | Eucgr.B03921.1.p |