PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.B03703.1.p | ||||||||
Common Name | EUGRSUZ_B03703, LOC104435695 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 249aa MW: 28132.1 Da PI: 4.7722 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 122.7 | 3.2e-38 | 54 | 184 | 2 | 129 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 p GfrF+Ptd+el+ +yLk+kv+g+++++ +v+++vd+yk++P L + + + +ewyfF+++d+k+++ +r++r t sg+W tgkd Eucgr.B03703.1.p 54 PDGFRFDPTDQELIIHYLKPKVAGDPIPIGDVFADVDLYKFDPGMLIEnhqGAGIDGDEWYFFTPSDTKHPSRSRPTRFTPSGFWWVTGKDSV 146 89********************************************742223334778*********************************99 PP NAM 92 vlskkgelvglkktLvfykg.rapkgektdWvmheyrle 129 + +++++g k +L+fy+ +++++ t W+mheyrle Eucgr.B03703.1.p 147 IRM-ENKTIGYKSSLAFYRVdSQSRSDGTAWCMHEYRLE 184 999.9999**********8746777889*********85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.48E-45 | 50 | 215 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 44.317 | 53 | 216 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.0E-23 | 54 | 183 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MEKNDQSHNR DRDDQPEGMH VDGQLKVGVD PCTPSSSQEL VASPPSPPSL ADFPDGFRFD 60 PTDQELIIHY LKPKVAGDPI PIGDVFADVD LYKFDPGMLI ENHQGAGIDG DEWYFFTPSD 120 TKHPSRSRPT RFTPSGFWWV TGKDSVIRME NKTIGYKSSL AFYRVDSQSR SDGTAWCMHE 180 YRLEEDEKRD RASVDGKKGG KDKMLDEWVL CKVYTPKHGQ QSDLSPKERD RPNLDWPDGD 240 GDCRQFSS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 5e-37 | 47 | 221 | 11 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-37 | 47 | 221 | 11 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-37 | 47 | 221 | 11 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-37 | 47 | 221 | 11 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-37 | 47 | 221 | 14 | 173 | NAC domain-containing protein 19 |
3swm_B | 5e-37 | 47 | 221 | 14 | 173 | NAC domain-containing protein 19 |
3swm_C | 5e-37 | 47 | 221 | 14 | 173 | NAC domain-containing protein 19 |
3swm_D | 5e-37 | 47 | 221 | 14 | 173 | NAC domain-containing protein 19 |
3swp_A | 5e-37 | 47 | 221 | 14 | 173 | NAC domain-containing protein 19 |
3swp_B | 5e-37 | 47 | 221 | 14 | 173 | NAC domain-containing protein 19 |
3swp_C | 5e-37 | 47 | 221 | 14 | 173 | NAC domain-containing protein 19 |
3swp_D | 5e-37 | 47 | 221 | 14 | 173 | NAC domain-containing protein 19 |
4dul_A | 5e-37 | 47 | 221 | 11 | 170 | NAC domain-containing protein 19 |
4dul_B | 5e-37 | 47 | 221 | 11 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.B03703.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010046701.1 | 0.0 | PREDICTED: NAC transcription factor ONAC010 | ||||
TrEMBL | A0A059D9B1 | 0.0 | A0A059D9B1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010046701.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM35315 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 2e-38 | NAC domain containing protein 47 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.B03703.1.p |
Entrez Gene | 104435695 |