PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.B03044.1.p

Common Name

EUGRSUZ_B03044

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

G2-like

Protein Properties

Length: 263aa MW: 29024 Da PI: 4.7628

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.B03044.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	32.2	2.4e-10	217	242	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 k+r++W++eLH+ F++a++qLGG++ Eucgr.B03044.1.p 217 KQRRCWSTELHRGFLHALQQLGGPDG 242 79*********************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.4E-7	214	241	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence Send to blast
MEYPERTRSY VEALEEERRK IQVFERELPL CLELVIQAIE RCKQQLSVQG HSSECNSEQT 60 SMDDGRVLEV FIPLKGPYSG DDDEDDACEE EGDGDGDGDG DVHHSSRDDK GGDDNAMEKS 120 DWLRSAQLWN PNPDPIPHRE VQDPPPPPPP SKEVAAVANH LKSHESGAFR PFRIGENNST 180 KKKQPPGRAA SPAPDAAACS TAETASGRTS KQAAQRKQRR CWSTELHRGF LHALQQLGGP 240 DGLCPFLEIS PVCYLPHHLT LD*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.B03044.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010044289.1	1e-177	PREDICTED: myb family transcription factor EFM
TrEMBL	A0A059D6Z4	0.0	A0A059D6Z4_EUCGR; Uncharacterized protein
STRING	XP_010044289.1	1e-177	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM3491	28	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	2e-38	G2-like family protein

Link Out ? help Back to Top
Phytozome	Eucgr.B03044.1.p