PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.B02808.1.p | ||||||||
Common Name | EUGRSUZ_B02808 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 131aa MW: 14575.8 Da PI: 10.5521 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.2 | 6e-13 | 32 | 126 | 2 | 99 |
EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+v ++s++l ++++++p ++eh +g+ + t tl+ + sW vkl y + g+ l +GW +F + LkegD+++F+l++ ++ el+ Eucgr.B02808.1.p 32 FTVVIRSHNLLKQNVTVPGGILREHiNGS-MQ--TATLKY-RDGSWPVKLLYYPQHGSGKLLAGWASFHRGTYLKEGDVCLFELVRIDNVELK 120 56788999999999***********6333.34..566555.4469*****9977777756677*********************988999999 PP EEEE-S CS B3 94 vkvfrk 99 v+ fr+ Eucgr.B02808.1.p 121 VSNFRR 126 999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 6.0E-15 | 25 | 127 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.31E-14 | 26 | 127 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 8.63E-14 | 30 | 125 | No hit | No description |
PROSITE profile | PS50863 | 10.405 | 31 | 127 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.4E-11 | 32 | 126 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 6.9E-6 | 32 | 127 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence Send to blast |
MLASRSSTSK RSKKVTTALK GANEDELQCP SFTVVIRSHN LLKQNVTVPG GILREHINGS 60 MQTATLKYRD GSWPVKLLYY PQHGSGKLLA GWASFHRGTY LKEGDVCLFE LVRIDNVELK 120 VSNFRRNAKI * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.B02808.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018724504.1 | 1e-93 | PREDICTED: B3 domain-containing protein REM19-like | ||||
TrEMBL | A0A059D7B1 | 2e-92 | A0A059D7B1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010046516.1 | 2e-45 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14804 | 4 | 15 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-14 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.B02808.1.p |