PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B01542.1.p
Common NameEUGRSUZ_B01542
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 91aa    MW: 10855.5 Da    PI: 8.9106
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B01542.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.92.8e-092051741
               AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaee 41
                      rw++ +g+++AeIrdp  ng  +r +l +f taee
  Eucgr.B01542.1.p 20 RWRP-WGKFAAEIRDPLRNG--TRLWLRTFETAEE 51
                      8***.**********86676..**********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103212.036351IPR001471AP2/ERF domain
SMARTSM003800.00241566IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-91651IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.0E-121651IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MGKKRGSRSR CDQNRYCAFR WRPWGKFAAE IRDPLRNGTR LWLRTFETAE EPRFVIIRCV  60
SSTEPSRDMI EFEYLDHKLL EELLMSHSDM *
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B01542.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018718621.15e-60PREDICTED: ethylene-responsive transcription factor ERF098-like
TrEMBLA0A059D3C11e-60A0A059D3C1_EUCGR; Uncharacterized protein
STRINGXP_010045996.12e-19(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3458322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-17ERF family protein