PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.B00720.1.p | ||||||||
Common Name | EUGRSUZ_B00720, LOC104421622 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 339aa MW: 37714.1 Da PI: 4.9323 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.1 | 6.9e-16 | 122 | 169 | 1 | 52 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 s y+GVr+++ +g+++AeIrdp +r r++lg+f taeeAa a+ + +++ Eucgr.B00720.1.p 122 SEYRGVRRRP-WGKYAAEIRDP----IRkVRVWLGTFNTAEEAALAYQRKKLE 169 569*******.**********7....246******************887766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 5.29E-23 | 122 | 170 | No hit | No description |
SuperFamily | SSF54171 | 1.05E-16 | 122 | 170 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.2E-22 | 123 | 170 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.0E-20 | 123 | 177 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.48 | 123 | 182 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.5E-10 | 123 | 170 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.4E-11 | 124 | 135 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.4E-11 | 146 | 162 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MPRIDRRLWH PITSCKKVKG KRPGDEKNLE HVRRIRVMYN DPDATDSSSS DDEGMYIAEG 60 GMFKQNKQVI KEIVIPVNSH KSSGEGCSRA NNGSQKYISI SKKFGCAASA RQEKNNVPPT 120 PSEYRGVRRR PWGKYAAEIR DPIRKVRVWL GTFNTAEEAA LAYQRKKLEF DALSVPGKNN 180 TTCQHLTGPA FLVPSPSSVL DVPSSSSSGN RHEVSALEQR GKDKVQIFGN ARSEPHLDDD 240 SCIQEFLLEP VPSMSITEEF YCAEEFYCGG LDKNLLLQDE SDDVLQDGIA GTDENLGEGE 300 FGEGEFGEDK MHDLANIEIN LDKEELAWID EALNFPSL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 6e-16 | 124 | 165 | 3 | 45 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.B00720.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010031938.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor ERF119 | ||||
Refseq | XP_010031952.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor ERF119 | ||||
Refseq | XP_018723292.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor ERF119 | ||||
Refseq | XP_018723293.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor ERF119 | ||||
TrEMBL | A0A059CZR5 | 0.0 | A0A059CZR5_EUCGR; Uncharacterized protein | ||||
STRING | XP_010031938.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 3e-22 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.B00720.1.p |
Entrez Gene | 104421622 |