PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.A02171.1.p

Common Name

EUGRSUZ_A02171

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 291aa MW: 31891.2 Da PI: 6.8846

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.A02171.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.7	1.1e-12	247	288	5	46
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +r +r++kNRe+A rsR+R++a++ eLe kv Le+eN +L+ Eucgr.A02171.1.p 247 RRRKRMIKNRESAARSRARRQAYTHELEHKVMRLEEENARLR 288 688999***********************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	5.9E-14	240	290	No hit	No description
SMART	SM00338	7.1E-7	243	290	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.553	245	291	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.0E-10	247	289	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.03E-9	247	290	No hit	No description
PROSITE pattern	PS00036	0	250	265	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence Send to blast
MASQGGGSSG AVQAAESQIL ARQGSLYGLT LDEVQNQLSH LGKPLGSMNL DELLESVRSA 60 EADLGPRPGA AGVQPLAKDL CKKTVEEVWK DIQQVNKKKN GIENHLCNER VGEEERVPTF 120 GEITLEDFLL KAGVMAELPP VGQNGGLISG LDSAPAPQPY VPQCIQWMQY HLPSIPQSQN 180 VMTGPTAGDH MVQPRIPIVT HPSVDLGYPD TQISMSPSTL IGALSDVQSP GQNTVMPGDV 240 VEKTVERRRK RMIKNRESAA RSRARRQAYT HELEHKVMRL EEENARLRRQ R

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.A02171.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010055343.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_010055351.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_010055360.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	2e-75	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A059DIB4	0.0	A0A059DIB4_EUCGR; Uncharacterized protein (Fragment)
STRING	XP_010055343.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1884	28	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-56	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	Eucgr.A02171.1.p

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]