PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A00772.1.p
Common NameEUGRSUZ_A00772
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 418aa    MW: 46982.1 Da    PI: 6.6685
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A00772.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS275.41.8e-84484162373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++ L+e+A+a+ +g    a+++L+r s    p  ++  +l  y+  AL++ l+     +     p + +e  ++e++++++ ++++sP+++fs
  Eucgr.A00772.1.p  48 KQSLVEAATAIYEGRVDVASEILTRSSGVLKPISNSEWKLMGYMISALKSCLSP----VNY---PPPVAELFTEEHVSSVRSLYDMSPCFEFS 133
                       578**************************************************9....332...22222234899999*************** PP

              GRAS  95 hltaNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                       +++a +aI ea++++   +++H+iDfdi+  +Q+  Ll+aL     +++ +l+iT++++ + + +e+l+ +g+rL+++A++ gv++ fn+ v 
  Eucgr.A00772.1.p 134 FMAASHAIFEAASEQpstNKLHVIDFDIGREAQYNVLLRALPMFHaGNQSTLKITTLAD-SIDGAERLRMLGDRLSEVAAKEGVRLVFNI-VR 224
                       *************9999999**********************66637788*********.7779*************************9.79 PP

              GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       ++l++l+ ++L ++ +E+laVnl+++l++++desvs+e++rde+L++vk+l P+vv++ eqe++ n++++  r+ eal yy a+++s+e ++p
  Eucgr.A00772.1.p 225 QKLSELSRDSLGCEADEVLAVNLAFKLYKMPDESVSMENTRDELLRCVKGLAPQVVTLLEQEMNGNTAPLPMRVEEALAYYGAVLESIEYTMP 317
                       9******************************************************************************************** PP

              GRAS 277 reseerikvErel.....lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkd 364
                        +s er+  E+++     lg+++ n+vaceg++r+er+e +++Wr+r+++aGF+   l+++ +kq  +    ++s  ++v+ee+g +++gW++
  Eucgr.A00772.1.p 318 WKSLERARAEERVraeagLGQKLGNWVACEGRDRVERCEVFGTWRARMRMAGFQ---LKTQSMKQWLYHCPWTSSPRMMVKEENGGFCFGWRG 407
                       9996555555544333339**********************************5...88899999999999999888**************** PP

              GRAS 365 rpLvsvSaW 373
                       r+ ++vSaW
  Eucgr.A00772.1.p 408 RTFTVVSAW 416
                       ********* PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098535.41621400IPR005202Transcription factor GRAS
PfamPF035146.2E-8248416IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MSPLESVKIP VQSFPVESFE NLVRRLQRSP VEIVKPPVQR SPLSISWKQS LVEAATAIYE  60
GRVDVASEIL TRSSGVLKPI SNSEWKLMGY MISALKSCLS PVNYPPPVAE LFTEEHVSSV  120
RSLYDMSPCF EFSFMAASHA IFEAASEQPS TNKLHVIDFD IGREAQYNVL LRALPMFHAG  180
NQSTLKITTL ADSIDGAERL RMLGDRLSEV AAKEGVRLVF NIVRQKLSEL SRDSLGCEAD  240
EVLAVNLAFK LYKMPDESVS MENTRDELLR CVKGLAPQVV TLLEQEMNGN TAPLPMRVEE  300
ALAYYGAVLE SIEYTMPWKS LERARAEERV RAEAGLGQKL GNWVACEGRD RVERCEVFGT  360
WRARMRMAGF QLKTQSMKQW LYHCPWTSSP RMMVKEENGG FCFGWRGRTF TVVSAWC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A3e-288641642374GRAS family transcription factor containing protein, expressed
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A00772.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018731206.10.0PREDICTED: DELLA protein GAIP-B
SwissprotQ9FYR71e-112SCL8_ARATH; Scarecrow-like protein 8
TrEMBLA0A059DD980.0A0A059DD98_EUCGR; Uncharacterized protein
STRINGXP_010067047.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM43502856
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-110SCARECROW-like 8