PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A00769.1.p
Common NameEUGRSUZ_A00769
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 408aa    MW: 45553.1 Da    PI: 7.3418
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A00769.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS300.83.5e-92414073374
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       + L+e+A+a+  g    a+++L r+s + +p  ++ q+l  y++ AL++r++      ++  pp ++    ++e++ +++ ++++sP++++++
  Eucgr.A00769.1.p  41 QSLVEAATAIYGGRVDVASQILRRMSAMPNPMSNSKQKLMGYMLSALESRVSP-----VDYPPPVAE--LFTEEHVLSVQSLYDMSPCFRVGF 126
                       78**************************************************9.....333333222..2478999999************** PP

              GRAS  96 ltaNqaIleavege...ervHiiDfdisqGlQWpaLlqaLa.sRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       ++aN+aIlea++++   +++H+iDfdi+   Q+ +Ll aL+ s+++++ +l+iT++++ + + +e+l+ +g+rL+++ ++ gv++ fn+ v +
  Eucgr.A00769.1.p 127 MAANRAILEALSEQpstNKLHVIDFDIGREKQYHNLLAALSiSQAGNQSTLKITTLAD-SINGEERLRMIGDRLSELTAKEGVRLVFNI-VRQ 217
                       *************999999**********************77779999*********.66799************************9.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       +l++l+ ++L ++p+E+laVnl+++l+r++d+svs e++r ++L+ vk+l P+vv++ eqe++ n+++F  r+ eal yy al++s+e +   
  Eucgr.A00769.1.p 218 KLSELSRDSLGCEPDEVLAVNLAFKLYRMPDKSVSAENPRYDLLRRVKGLGPRVVTLLEQEMNGNTAPFPMRMEEALVYYGALLESIEYS-QG 309
                       ****************************************************************************************99.56 PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyr.veeesgslvlgWkdrpLv 368
                       ++ er+  E+  l+r++ n+vaceg +r+er+e ++kWr+r+++aGF+  p   ++a++ +  lr +  + g+r ++ee+g +++gW++r+L+
  Eucgr.A00769.1.p 310 DQWERARAEEG-LSRKLGNLVACEGGDRVERCEVFGKWRDRMGMAGFELKPQVRHVAESLEEALRCCRpNSGFRtMKEENGGFCFGWRGRTLI 401
                       67788888888.************************************************************972568899999********* PP

              GRAS 369 svSaWr 374
                       ++SaWr
  Eucgr.A00769.1.p 402 VASAWR 407
                       *****8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098542.26713385IPR005202Transcription factor GRAS
PfamPF035141.2E-8941407IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MSGVSKGSES VKGPFRRLQR SAVESVETPV QWSPVSISWE QSLVEAATAI YGGRVDVASQ  60
ILRRMSAMPN PMSNSKQKLM GYMLSALESR VSPVDYPPPV AELFTEEHVL SVQSLYDMSP  120
CFRVGFMAAN RAILEALSEQ PSTNKLHVID FDIGREKQYH NLLAALSISQ AGNQSTLKIT  180
TLADSINGEE RLRMIGDRLS ELTAKEGVRL VFNIVRQKLS ELSRDSLGCE PDEVLAVNLA  240
FKLYRMPDKS VSAENPRYDL LRRVKGLGPR VVTLLEQEMN GNTAPFPMRM EEALVYYGAL  300
LESIEYSQGD QWERARAEEG LSRKLGNLVA CEGGDRVERC EVFGKWRDRM GMAGFELKPQ  360
VRHVAESLEE ALRCCRPNSG FRTMKEENGG FCFGWRGRTL IVASAWR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3h_B9e-323940732419Protein SHORT-ROOT
5b3h_E9e-323940732419Protein SHORT-ROOT
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A00769.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018727388.10.0PREDICTED: scarecrow-like protein 8
SwissprotQ9FYR71e-127SCL8_ARATH; Scarecrow-like protein 8
TrEMBLA0A059DD350.0A0A059DD35_EUCGR; Uncharacterized protein
STRINGXP_010043392.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM43502856
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-130SCARECROW-like 8