PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A00766.1.p
Common NameEUGRSUZ_A00766
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 393aa    MW: 44333 Da    PI: 8.5389
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A00766.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS293.55.7e-90283914373
              GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                       lLle+A+a+++g    a+++L rls  ++p  ++ q+l  y++ AL++r++     +    p+ e     ++e++++++ ++++s ++++s+ 
  Eucgr.A00766.1.p  28 LLLEAATAIDEGRVDVASEILRRLSAVRNPMSNSKQKLMGYMLSALKSRVSP----IDYPPPVAE---LFTEEHVSSVRSLYDLSRCFELSFA 113
                       89*************************************************9....332223333...34899999***************** PP

              GRAS  97 taNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       +aN aI ea++++   +++H+iDfdi+   Q+ +Ll+ L  R+ +++ +l+iT++++ +   +e+l+ +++rL+ +A+e gv++ fn+ v ++
  Eucgr.A00766.1.p 114 AANLAIWEAASEQpstNKLHVIDFDIGREEQYDNLLDDLCRRRkRNQLTLKITALAD-SIIAAERLRMLKDRLSLYAAEKGVRLAFNI-VRQK 204
                       ***********9999999**********************88836666*********.556**************************9.799* PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       l++l+ ++L ++p+E+laVnl+++l+r++desvs e++rde+L+ vk+l P+vv++ve+e++ n+++F  r+ eal yy al++s+++ ++ +
  Eucgr.A00766.1.p 205 LSELSRDSLGCEPDEVLAVNLAFKLYRMPDESVSAENTRDELLRRVKGLAPQVVTLVEREMNGNTAPFPMRVEEALAYYGALLESIQSRFSWK 297
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       s+er+  E+  l++++ n vaceg++r+er+e ++kWr r+++aGF+  pl+ ++ak+ + +++  +  + +v+ee+g  ++ W +r+L+++S
  Eucgr.A00766.1.p 298 SSERARAEEG-LRWKLGNSVACEGRDRVERCEVFGKWRTRMGMAGFELKPLGRDVAKSYQEIVHCQGLCEITVKEENGGCCFRWLGRTLTVTS 389
                       **********.*****************************************************999777*********************** PP

              GRAS 372 aW 373
                       aW
  Eucgr.A00766.1.p 390 AW 391
                       ** PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098540.1091372IPR005202Transcription factor GRAS
PfamPF035142.0E-8728391IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MSPVQRPPVK SAKTRVRRSS VSILCEPLLL EAATAIDEGR VDVASEILRR LSAVRNPMSN  60
SKQKLMGYML SALKSRVSPI DYPPPVAELF TEEHVSSVRS LYDLSRCFEL SFAAANLAIW  120
EAASEQPSTN KLHVIDFDIG REEQYDNLLD DLCRRRKRNQ LTLKITALAD SIIAAERLRM  180
LKDRLSLYAA EKGVRLAFNI VRQKLSELSR DSLGCEPDEV LAVNLAFKLY RMPDESVSAE  240
NTRDELLRRV KGLAPQVVTL VEREMNGNTA PFPMRVEEAL AYYGALLESI QSRFSWKSSE  300
RARAEEGLRW KLGNSVACEG RDRVERCEVF GKWRTRMGMA GFELKPLGRD VAKSYQEIVH  360
CQGLCEITVK EENGGCCFRW LGRTLTVTSA WH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A6e-31203911374GRAS family transcription factor containing protein, expressed
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A00766.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066942.10.0PREDICTED: scarecrow-like protein 8
SwissprotQ9FYR71e-123SCL8_ARATH; Scarecrow-like protein 8
TrEMBLA0A059DD930.0A0A059DD93_EUCGR; Uncharacterized protein
STRINGXP_010066942.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM43502856
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-125SCARECROW-like 8