PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.A00494.2.p | ||||||||
Common Name | EUGRSUZ_A00494, LOC104417076 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 374aa MW: 41660.4 Da PI: 4.8441 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 39.6 | 1.7e-12 | 12 | 116 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 ++F+ + eel L+ ++g++l+ +vi++ + y++ P++Lp + wy + + nra+++g+Wk +g+ +v ++ Eucgr.A00494.2.p 12 IKFDCSHEELF-MLLECILSGSSLPR-NVITDSNPYDYRPENLP-------DIWYLIRS---------EDNRAIENGFWKPKGNPLKVPL-NS 85 6899999**99.88999999999999.99**************9.......34665544.........35799***************99.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + g +tLvf + +a + ktdW+m+ey++ Eucgr.A00494.2.p 86 SISGWITTLVFCDPQALEDFKTDWIMQEYKI 116 99***************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 19.831 | 8 | 139 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.9E-7 | 12 | 116 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.71E-21 | 13 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 374 aa Download sequence Send to blast |
MSPPAAEPLA DIKFDCSHEE LFMLLECILS GSSLPRNVIT DSNPYDYRPE NLPDIWYLIR 60 SEDNRAIENG FWKPKGNPLK VPLNSSISGW ITTLVFCDPQ ALEDFKTDWI MQEYKITWDG 120 LNCDTRAKGV NCLCRVFQEH VHQVDQKMAQ TFDGSDISRG NNNLSTASLT ITSRSNAEKG 180 STSNHQAVAA DILQNHPLED LHADVDLLDG FLELQDLENP QSPSSSSDNS SCVTMSSDEC 240 FDSLALLRDI EAERLQEVEK KDEHAKFSVS TVKPSNVVTH EVTSGSFTSH EREDIPKTGS 300 SLLNTAPAIR SKAVDRRNPK HVLGDGESQS GCENIASHAS TSEDTSALER RRKSDKKNKM 360 FKKLCFLPFQ FLF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 349 | 363 | RRRKSDKKNKMFKKL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.A00494.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010026789.1 | 0.0 | PREDICTED: NAC domain-containing protein 105 isoform X2 | ||||
Refseq | XP_010026844.1 | 0.0 | PREDICTED: NAC domain-containing protein 105 isoform X2 | ||||
TrEMBL | A0A059DCF6 | 0.0 | A0A059DCF6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010026728.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 6e-12 | NAC domain containing protein 28 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.A00494.2.p |
Entrez Gene | 104417076 |