PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A00494.1.p
Common NameEUGRSUZ_A00494, LOC104417076
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 375aa    MW: 41789.6 Da    PI: 4.7911
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A00494.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.54.2e-13121175128
               NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                       ++F+ + eel    L+  ++g++l+  +vi++ + y++ P++Lp      e+ wy   +         + nra+++g+Wk +g+  +v   ++
  Eucgr.A00494.1.p  12 IKFDCSHEELF-MLLECILSGSSLPR-NVITDSNPYDYRPENLP------EDIWYLIRS---------EDNRAIENGFWKPKGNPLKVPL-NS 86 
                       689999****9.88999999*99999.99**************9......234655443.........35799***************99.99 PP

               NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                       +  g  +tLvf + +a +  ktdW+m+ey++
  Eucgr.A00494.1.p  87 SISGWITTLVFCDPQALEDFKTDWIMQEYKI 117
                       99***************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.9758140IPR003441NAC domain
PfamPF023654.0E-712117IPR003441NAC domain
SuperFamilySSF1019414.18E-2113140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MSPPAAEPLA DIKFDCSHEE LFMLLECILS GSSLPRNVIT DSNPYDYRPE NLPEDIWYLI  60
RSEDNRAIEN GFWKPKGNPL KVPLNSSISG WITTLVFCDP QALEDFKTDW IMQEYKITWD  120
GLNCDTRAKG VNCLCRVFQE HVHQVDQKMA QTFDGSDISR GNNNLSTASL TITSRSNAEK  180
GSTSNHQAVA ADILQNHPLE DLHADVDLLD GFLELQDLEN PQSPSSSSDN SSCVTMSSDE  240
CFDSLALLRD IEAERLQEVE KKDEHAKFSV STVKPSNVVT HEVTSGSFTS HEREDIPKTG  300
SSLLNTAPAI RSKAVDRRNP KHVLGDGESQ SGCENIASHA STSEDTSALE RRRKSDKKNK  360
MFKKLCFLPF QFLF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1350364RRRKSDKKNKMFKKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A00494.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010026789.10.0PREDICTED: NAC domain-containing protein 105 isoform X2
RefseqXP_010026844.10.0PREDICTED: NAC domain-containing protein 105 isoform X2
TrEMBLA0A059DBX40.0A0A059DBX4_EUCGR; Uncharacterized protein
STRINGXP_010026728.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137081023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.14e-12NAC domain containing protein 28