PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.A00362.1.p | ||||||||
Common Name | EUGRSUZ_A00362 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 133aa MW: 15421.9 Da PI: 10.4352 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 75.3 | 1.4e-23 | 2 | 108 | 13 | 115 |
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 elv++yLk +++ e++i+evd++++ PwdLp k ++k + +ew+fFs+ ++ky+++kr +r+ + g Wk tgk +++ ++ +++ Eucgr.A00362.1.p 2 ELVNQYLKTLGNETV---EQIIPEVDVHQLPPWDLPgKinelsRIKLDGDEWFFFSRLQNKYPQSKRVRRTNDYGSWKPTGKPHKIRTQdRKN 91 9******76443333...368***************44677766666889************************************9997788 PP NAM 99 lvglkktLvfykgrapk 115 + glkk+Lvf + + pk Eucgr.A00362.1.p 92 TLGLKKILVFKNVKVPK 108 8*********9877665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02365 | 2.4E-8 | 1 | 107 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 24.224 | 1 | 132 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.16E-21 | 2 | 102 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 133 aa Download sequence Send to blast |
DELVNQYLKT LGNETVEQII PEVDVHQLPP WDLPGKINEL SRIKLDGDEW FFFSRLQNKY 60 PQSKRVRRTN DYGSWKPTGK PHKIRTQDRK NTLGLKKILV FKNVKVPKML IPNGYCMNTV 120 SSMIRVTSFF TA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 8e-16 | 1 | 108 | 26 | 127 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.A00362.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010064391.1 | 1e-63 | PREDICTED: protein NTM1-like 9 | ||||
Refseq | XP_010064501.1 | 1e-63 | PREDICTED: protein NTM1-like 9 | ||||
Refseq | XP_018725712.1 | 1e-63 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A059DCN3 | 3e-93 | A0A059DCN3_EUCGR; Uncharacterized protein (Fragment) | ||||
STRING | XP_010064391.1 | 4e-63 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 8e-23 | NAC 014 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.A00362.1.p |