PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.A00359.1.p | ||||||||
Common Name | EUGRSUZ_A00359 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 339aa MW: 38646.1 Da PI: 4.6738 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 143.7 | 1e-44 | 4 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrFh tdeel+++yLk+k+ g++ + ++i+e+di+++ePw+Lp+ +++ ++ke+ fF++ ++ky ++kr+ r+t++gyWk tgk++ Eucgr.A00359.1.p 4 LPPGFRFHATDEELLMHYLKPKILGQPgEHYYDMIPEIDICEFEPWQLPAmfSHRFNSKELIFFCRVKRKYLNSKRSDRTTEAGYWKVTGKER 96 79*************************7556788***************6233444778********************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++s+ +e +g+kktLvfy gr pkg++t+Wv hey++ Eucgr.A00359.1.p 97 AIMSEeANEPIGIKKTLVFYAGRVPKGKRTNWVSHEYHI 135 ****866778***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.85E-45 | 3 | 144 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 48.188 | 4 | 171 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-21 | 5 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MRALPPGFRF HATDEELLMH YLKPKILGQP GEHYYDMIPE IDICEFEPWQ LPAMFSHRFN 60 SKELIFFCRV KRKYLNSKRS DRTTEAGYWK VTGKERAIMS EEANEPIGIK KTLVFYAGRV 120 PKGKRTNWVS HEYHINPKCL GHNEDEVTFW FSFICTTELM LPYVACRIKN KKEKKLMMGQ 180 APTVSPEVYS SSPQAPTVSP EVYSSSPHAY NSNVSETPVN QEGDYSSFCN SPSDEVPDNQ 240 EAVDAQPEMS VGDLMESLPP LHPLDDILSD YNITPTYQAQ AGTEEGWSSL FDFAYDNYGE 300 ELDYGYMKSP YSNFANYSNT DWAMSGDFST TTREDSLS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-32 | 3 | 135 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-32 | 3 | 135 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-32 | 3 | 135 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-32 | 3 | 135 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-32 | 3 | 135 | 19 | 145 | NAC domain-containing protein 19 |
3swm_B | 2e-32 | 3 | 135 | 19 | 145 | NAC domain-containing protein 19 |
3swm_C | 2e-32 | 3 | 135 | 19 | 145 | NAC domain-containing protein 19 |
3swm_D | 2e-32 | 3 | 135 | 19 | 145 | NAC domain-containing protein 19 |
3swp_A | 2e-32 | 3 | 135 | 19 | 145 | NAC domain-containing protein 19 |
3swp_B | 2e-32 | 3 | 135 | 19 | 145 | NAC domain-containing protein 19 |
3swp_C | 2e-32 | 3 | 135 | 19 | 145 | NAC domain-containing protein 19 |
3swp_D | 2e-32 | 3 | 135 | 19 | 145 | NAC domain-containing protein 19 |
4dul_A | 2e-32 | 3 | 135 | 16 | 142 | NAC domain-containing protein 19 |
4dul_B | 2e-32 | 3 | 135 | 16 | 142 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.A00359.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010064990.1 | 0.0 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A059DBY1 | 0.0 | A0A059DBY1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010064990.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM18606 | 4 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 9e-45 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.A00359.1.p |