PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.A00357.2.p | ||||||||
Common Name | EUGRSUZ_A00357, LOC104451402 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 309aa MW: 35097.6 Da PI: 6.6865 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 131.5 | 6e-41 | 11 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lp+GfrF+Ptdeelv++yLk k+ g+k+ + ++i+evd++++ PwdLp k ++k++ +ew+fFs+ ++ky+++kr++r+ + g Wk tg Eucgr.A00357.2.p 11 LPVGFRFRPTDEELVNQYLKLKTLGNKTVE-QIIPEVDVHQLPPWDLPgKinelsRIKSDGDEWFFFSRLQNKYPQSKRARRTNDYGSWKPTG 102 79************************9766.89***************54788887778899******************************* PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k++++ ++ k+++ glkk+Lvf k ++pk +t+Wv+hey++ Eucgr.A00357.2.p 103 KTHKIRTQdKKNTLGLKKILVFKKRQSPKNAHTKWVLHEYSV 144 ******9967778***************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.94E-43 | 6 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 43.849 | 11 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.8E-22 | 12 | 144 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence Send to blast |
MESVEISLVD LPVGFRFRPT DEELVNQYLK LKTLGNKTVE QIIPEVDVHQ LPPWDLPGKI 60 NELSRIKSDG DEWFFFSRLQ NKYPQSKRAR RTNDYGSWKP TGKTHKIRTQ DKKNTLGLKK 120 ILVFKKRQSP KNAHTKWVLH EYSVLNDQSD FVLYRLKKNP DEKGMKNSKT QKTNTGISIM 180 PQEGSTSNPN LSDEVNNTSI PIMPQEGSRS SQNSPDEVNN TSCSNTLVIA KSMVPEEILK 240 ESLKENVHQP QMPILSPEWN SSQCDFSAAP QPPPAAREQF TPDPGCQDLE SYFADTELLQ 300 EILEMLTP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-27 | 9 | 163 | 13 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.A00357.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010064391.1 | 0.0 | PREDICTED: protein NTM1-like 9 | ||||
Refseq | XP_010064501.1 | 0.0 | PREDICTED: protein NTM1-like 9 | ||||
Refseq | XP_018725712.1 | 0.0 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A059DC64 | 0.0 | A0A059DC64_EUCGR; Uncharacterized protein | ||||
STRING | XP_010064391.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.3 | 2e-43 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.A00357.2.p |
Entrez Gene | 104451402 |