PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS762054.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 157aa MW: 17458.3 Da PI: 9.59 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.3 | 5.6e-08 | 4 | 59 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C.......TTS-.STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.as....kapskK.lsKaeiLekAveYIksLq 55 ++r++ RRd+i + + +Lr ++P ++ + +s ae L++A YIk L+ EcS762054.10 4 PKRDKCRRDNIAELYLKLRPMVPGvCPkvpsRSHSVSyAPRAELLREAFLYIKFLE 59 5899********************8779*99666666699*************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.801 | 1 | 58 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0017 | 4 | 64 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.15E-5 | 4 | 62 | No hit | No description |
Pfam | PF00010 | 2.2E-5 | 4 | 59 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.32E-7 | 6 | 67 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.7E-6 | 8 | 69 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
HDGPKRDKCR RDNIAELYLK LRPMVPGVCP KVPSRSHSVS YAPRAELLRE AFLYIKFLEE 60 ERVRLEKLKM SSAQVIANSS SISVALSDSN LAVFAITSSV RRNLVTNIIS VFSQHRAEIL 120 AANVMAQEGW MSMTVTASVN DVADGAIEKI KQDILMV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010036858.1 | 2e-98 | PREDICTED: uncharacterized protein LOC104425763 | ||||
STRING | XP_010036858.1 | 9e-98 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM27980 | 2 | 3 |