PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcS759079.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

Dof

Protein Properties

Length: 308aa MW: 34165.7 Da PI: 7.0615

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcS759079.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.1	5.4e-40	29	90	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+al+cprC+stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++sss EcS759079.10 29 PEEALHCPRCESTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNRRSSS 90 7899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.4E-33	31	87	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	7.0E-26	31	85	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.301	33	87	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	35	71	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005730	Cellular Component	nucleolus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence Send to blast
MQEMGAHSLE SMLICPKPQQ DQRKPRPQPE EALHCPRCES TNTKFCYYNN YSLSQPRYFC 60 KSCRRYWTKG GTLRNVPVGG GCRKNRRSSS SSSSRRAQDQ GGPISTLINN NDYDTPNPFT 120 TLHSLTYDQS SDHMSLPFLG LHKFPYQLGP HELSHDILSY ANRSKNGHGD MNGGFLDSLK 180 NEFGLLENTQ NNVQDGHHRQ NLYYGYGSDG MNNNMGDPVD SGGAPSSCDH EMMSPAGSAN 240 EALGATSMKQ ELLCSDRDGE NRVLWGCPWQ MNGDQYRGNG VMGDVNSGRG SWNGLGSSWY 300 GLLNSPLV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010043694.1	0.0	PREDICTED: dof zinc finger protein DOF2.1 isoform X1
TrEMBL	A0A059D5B3	0.0	A0A059D5B3_EUCGR; Uncharacterized protein
STRING	XP_010043694.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM6960	27	43

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28510.1	5e-48	Dof family protein