PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS759079.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Dof | ||||||||
Protein Properties | Length: 308aa MW: 34165.7 Da PI: 7.0615 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 127.1 | 5.4e-40 | 29 | 90 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+al+cprC+stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++sss EcS759079.10 29 PEEALHCPRCESTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNRRSSS 90 7899******************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 1.4E-33 | 31 | 87 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 7.0E-26 | 31 | 85 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.301 | 33 | 87 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 35 | 71 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005730 | Cellular Component | nucleolus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence Send to blast |
MQEMGAHSLE SMLICPKPQQ DQRKPRPQPE EALHCPRCES TNTKFCYYNN YSLSQPRYFC 60 KSCRRYWTKG GTLRNVPVGG GCRKNRRSSS SSSSRRAQDQ GGPISTLINN NDYDTPNPFT 120 TLHSLTYDQS SDHMSLPFLG LHKFPYQLGP HELSHDILSY ANRSKNGHGD MNGGFLDSLK 180 NEFGLLENTQ NNVQDGHHRQ NLYYGYGSDG MNNNMGDPVD SGGAPSSCDH EMMSPAGSAN 240 EALGATSMKQ ELLCSDRDGE NRVLWGCPWQ MNGDQYRGNG VMGDVNSGRG SWNGLGSSWY 300 GLLNSPLV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010043694.1 | 0.0 | PREDICTED: dof zinc finger protein DOF2.1 isoform X1 | ||||
TrEMBL | A0A059D5B3 | 0.0 | A0A059D5B3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010043694.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6960 | 27 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28510.1 | 5e-48 | Dof family protein |