PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS756885.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 222aa MW: 25925.9 Da PI: 7.7779 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 119.3 | 3.7e-37 | 10 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 lp G+rFhPtdee v++yL+++v g + +i++vdi++++Pw+Lp+ + + + +ew+ ++ + ++ +r+t sgyWk+tg d EcS756885.10 10 LPIGYRFHPTDEEFVDHYLTNRVLGIVEDP-CIIPDVDICRWDPWELPQkfhgesiiRPDDKVQEWWCYCLQTP-----QQVKRTTPSGYWKKTGPD 100 699*********************998666.57***************6466655443333667******9866.....5789************** PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++v++ ++ ++g+kktLvf+ + +kg+kt+Wv+hey+l EcS756885.10 101 RNVKA-RDIKIGTKKTLVFHIRQGSKGVKTNWVIHEYHL 138 ****9.9999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.98E-45 | 5 | 161 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 39.69 | 10 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.2E-22 | 11 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MGAVIIPQNL PIGYRFHPTD EEFVDHYLTN RVLGIVEDPC IIPDVDICRW DPWELPQKFH 60 GESIIRPDDK VQEWWCYCLQ TPQQVKRTTP SGYWKKTGPD RNVKARDIKI GTKKTLVFHI 120 RQGSKGVKTN WVIHEYHLLI KNVLNLSLLN RNYVLCRIKH KGDEKADNST MELVYEASGL 180 ENLDSILRQP DHEDLFTEVR RKICLVRVLN ICLNEHGKCL ND |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-29 | 9 | 164 | 14 | 171 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066085.1 | 1e-140 | PREDICTED: NAC domain-containing protein 37 | ||||
TrEMBL | A0A059BC53 | 1e-137 | A0A059BC53_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066085.1 | 1e-140 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM35283 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 2e-42 | NAC transcription factor-like 9 |