PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EcS753436.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

GRAS

Protein Properties

Length: 146aa MW: 16230.4 Da PI: 4.4711

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcS753436.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	28.9	1.4e-09	46	105	2	61
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvsely 61 e Ll++Ae v +++ +a++lL + el+ ++ +p++R++ yf eAL++++ r++ +++ EcS753436.10 46 AEILLAAAEKVGCQQFDAASRLLDQCDELCGSTSNPVERVVYYFSEALREKIDRETGRVS 105 578*************************************************99666555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03514	4.9E-7	46	105	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence Send to blast
ETMMIASAKY IQSSSGAGDD LALPGHLYDY HLSCSSEDEV RNIQLAEILL AAAEKVGCQQ 60 FDAASRLLDQ CDELCGSTSN PVERVVYYFS EALREKIDRE TGRVSIEGLG KKMDLNLDED 120 IMRAKPPTML NHQLVPFSQI RQFSAI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010064981.2	4e-80	PREDICTED: DELLA protein GAI1
TrEMBL	A0A059DB60	5e-79	A0A059DB60_EUCGR; Uncharacterized protein
STRING	XP_010064981.1	4e-79	(Eucalyptus grandis)