PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS746304.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 70aa MW: 7663.72 Da PI: 10.1179 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 54.2 | 3.2e-17 | 32 | 70 | 1 | 39 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvk 39 k r+rWt+ LH++F+e+v++LGG+e A Pk il+lm+v+ EcS746304.10 32 KRRIRWTQHLHNQFLECVNRLGGAETAKPKLILKLMDVE 70 68***********************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.56E-7 | 29 | 69 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.0E-14 | 30 | 70 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.4E-11 | 32 | 70 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 70 aa Download sequence Send to blast |
LEKGPPVSRN EAKPDADPGG NSNSLAAATS SKRRIRWTQH LHNQFLECVN RLGGAETAKP 60 KLILKLMDVE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007028967.2 | 2e-15 | PREDICTED: myb family transcription factor PHL5 | ||||
Refseq | XP_021282746.1 | 2e-15 | myb family transcription factor PHL5 isoform X1 | ||||
Refseq | XP_023877406.1 | 1e-15 | myb family transcription factor PHL5-like | ||||
TrEMBL | A0A061EWJ5 | 1e-14 | A0A061EWJ5_THECC; Myb-like HTH transcriptional regulator family protein, putative isoform 2 | ||||
STRING | EOY09469 | 7e-15 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM19527 | 7 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.2 | 4e-14 | G2-like family protein |