PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS738638.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 155aa MW: 17646.2 Da PI: 9.531 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.8 | 8e-13 | 42 | 149 | 2 | 97 |
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangLkegDfvvFkld 85 +k lt+sd + ++rl + ++f+++h + ++ ++ +++++d++ + ++ + ++ +sg+yvl++GW keFvk gL +gD v ++ EcS738638.10 42 KKRLTQSDLGHLSRLLIGRDFVKSHflrwmseetvrQVESGRGADVIVRDLDTcSEHRLVFVFWASSGSYVLKGGWiKEFVKRRGLAAGDEVGIYW- 137 5889************************99888887555568999*****8887777788888*************999************99995. PP SS.SEE..EEEEE CS B3 86 gr.sefelvvkvf 97 + s e++++++ EcS738638.10 138 -EpSASEFHFSLL 149 .445555577665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.24E-15 | 40 | 149 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 2.15E-17 | 41 | 149 | No hit | No description |
SMART | SM01019 | 0.0034 | 41 | 152 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 4.1E-16 | 42 | 152 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 1.2E-9 | 43 | 147 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
TLIVEKKAKC KRTQKGKKEA SGCDAEEVST ELTLLFDPYK IKKRLTQSDL GHLSRLLIGR 60 DFVKSHFLRW MSEETVRQVE SGRGADVIVR DLDTCSEHRL VFVFWASSGS YVLKGGWIKE 120 FVKRRGLAAG DEVGIYWEPS ASEFHFSLLH RANQA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010042934.1 | 1e-111 | PREDICTED: putative B3 domain-containing protein At1g78640 | ||||
TrEMBL | A0A059C5A7 | 1e-109 | A0A059C5A7_EUCGR; Uncharacterized protein | ||||
STRING | XP_010042934.1 | 1e-110 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 8e-30 | B3 family protein |