PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS733904.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 186aa MW: 21244.6 Da PI: 9.4218 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.1 | 1.6e-32 | 107 | 165 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYY+Ct++gC+vkk+v+r ++d+ vv++tYeg H+h+ EcS733904.10 107 LDDGYRWRKYGQKAVKNNRFPRSYYKCTFQGCNVKKQVQRLTKDEGVVVTTYEGMHTHS 165 59********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.3E-34 | 92 | 165 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.4E-29 | 99 | 166 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.23 | 102 | 167 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.7E-38 | 107 | 166 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.5E-26 | 108 | 164 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0015074 | Biological Process | DNA integration | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MDGYHILFPP SSSSPASAAS PSFPFAHYAY KNAHAFHTGS EMMNHSNETC SSSEVKGELI 60 NSHTDVSRDD EDKAGSDKKK GPSSSSEKKK PRKPRYAFQT RSQVDILDDG YRWRKYGQKA 120 VKNNRFPRSY YKCTFQGCNV KKQVQRLTKD EGVVVTTYEG MHTHSIDKPT DNFEHILNQM 180 HIYNHF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 6e-28 | 97 | 166 | 7 | 76 | Probable WRKY transcription factor 4 |
2lex_A | 6e-28 | 97 | 166 | 7 | 76 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 86 | 93 | EKKKPRKP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010024173.1 | 1e-138 | PREDICTED: probable WRKY transcription factor 75 | ||||
TrEMBL | A0A059B3M4 | 1e-137 | A0A059B3M4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010024173.1 | 1e-137 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 5e-54 | WRKY DNA-binding protein 75 |