PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS731436.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 123aa MW: 14466.5 Da PI: 9.7956 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 67.6 | 1.8e-21 | 26 | 116 | 2 | 98 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + + +s v k + l +p kfa+eh + + + ++l+d +g++W+v + +++r+++++GW+ F +n+Lk gD+++F++ r+++e +v+++r EcS731436.10 26 MSYMRRSTVEKAKPLPVPSKFAKEHFLW--RRTNIVLRDAEGQTWKVAH--HCNGKRHYFSRGWQAFLYDNELKIGDVCIFEV--RNKEEVRVHIYR 116 56677899999999***********877..4457***************..7777889************************5..356667999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 1.45E-26 | 18 | 117 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 2.1E-27 | 18 | 116 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.51E-20 | 23 | 116 | No hit | No description |
PROSITE profile | PS50863 | 15.284 | 25 | 118 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 3.2E-9 | 25 | 118 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 6.5E-19 | 25 | 116 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence Send to blast |
NASTSEENAR LEAVKETFTS DFPFFMSYMR RSTVEKAKPL PVPSKFAKEH FLWRRTNIVL 60 RDAEGQTWKV AHHCNGKRHY FSRGWQAFLY DNELKIGDVC IFEVRNKEEV RVHIYRLPGT 120 SAI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010030658.2 | 2e-82 | PREDICTED: putative B3 domain-containing protein Os03g0621600 | ||||
TrEMBL | A0A059APE4 | 4e-81 | A0A059APE4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010030658.1 | 3e-82 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM20656 | 2 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 5e-11 | B3 family protein |