PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS727258.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 219aa MW: 25384.9 Da PI: 7.8103 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.3 | 2.8e-13 | 36 | 88 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+++h e+Er+RR+++ s f Lr+ lP + ++K s ++ +Av+YIk+Lq EcS727258.10 36 RKKKHREIERQRRQELASLFTSLRSKLPLEF--IKGKRSMSDYMNEAVNYIKHLQ 88 7899*************************65..*********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 6.02E-15 | 33 | 103 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 13.783 | 35 | 87 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.54E-11 | 36 | 92 | No hit | No description |
Pfam | PF00010 | 1.2E-10 | 36 | 88 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.5E-11 | 36 | 103 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.7E-5 | 41 | 93 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
METSNAIFKV VEDQRRRFSV TNYNKRTGED DDHGGRKKKH REIERQRRQE LASLFTSLRS 60 KLPLEFIKGK RSMSDYMNEA VNYIKHLQTK IRELSFKKDE LKSIHSLANL DSPSSDSSGL 120 TIFTVNSCCE SVEIVISRSI REKDLLLSTV LELLLQHGLD VVSCFSCQVN DRVLHTIHCE 180 LVSNLSNIYF RCADSHGYCQ SLYISFAFFW AEPFIQYDL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010061807.1 | 1e-127 | PREDICTED: transcription factor bHLH36-like | ||||
Refseq | XP_010061811.1 | 1e-127 | PREDICTED: transcription factor bHLH36-like | ||||
TrEMBL | A0A059DK50 | 1e-77 | A0A059DK50_EUCGR; Uncharacterized protein | ||||
STRING | XP_010061807.1 | 1e-127 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2968 | 27 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51780.1 | 2e-32 | bHLH family protein |