PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS714362.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 146aa MW: 16862.4 Da PI: 7.7634 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 61.5 | 1.4e-19 | 55 | 139 | 1 | 91 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k++++s+v++ +l lp +f++ h+ +++++t+tlede+g ++ v++i++k+ l++GWk+F +a +L egD++vF+l++ s f+ EcS714362.10 55 FLKTMVRSNVTTGFWLHLPMPFCKLHM--PRNNITVTLEDENGDEYPVNYIVDKTA----LSAGWKKFSSARELMEGDVLVFQLVRASVFK 139 89*********************9997..56889****************888887....************************9988884 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 6.0E-21 | 49 | 143 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 6.28E-24 | 51 | 144 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 7.54E-26 | 53 | 143 | No hit | No description |
PROSITE profile | PS50863 | 12.506 | 55 | 146 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 8.0E-17 | 55 | 139 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 6.7E-19 | 55 | 146 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence Send to blast |
TMHEQVASTY HRETKRQKRL VIDDLYHYDH VGGKSPAMER AEEFRANLPA EIPSFLKTMV 60 RSNVTTGFWL HLPMPFCKLH MPRNNITVTL EDENGDEYPV NYIVDKTALS AGWKKFSSAR 120 ELMEGDVLVF QLVRASVFKV TPFVFV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010028536.1 | 9e-98 | PREDICTED: B3 domain-containing protein Os01g0234100 | ||||
Refseq | XP_018718479.1 | 9e-98 | PREDICTED: B3 domain-containing protein Os01g0234100 | ||||
TrEMBL | A0A059AMR8 | 1e-68 | A0A059AMR8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010028536.1 | 3e-97 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM16717 | 10 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 1e-31 | B3 family protein |