PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS702777.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 126aa MW: 13523.2 Da PI: 10.4519 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.4 | 1.1e-10 | 92 | 126 | 2 | 41 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaee 41 y+G+r +++g+Wv+eIr+p++ ++r++lg++ t+e+ EcS702777.10 92 FYRGIR--SRSGKWVSEIREPRK---TTRVWLGTYPTPEM 126 69***6..678*********843...5**********996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 1.57E-7 | 92 | 126 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 0.0026 | 92 | 126 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 12.826 | 92 | 126 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.1E-4 | 93 | 126 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.59E-13 | 93 | 126 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 8.1E-14 | 93 | 126 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MSDPSSPKDE AHVVQSSAEL DPPPPQPLPS PSPPPPPPLA LHALDQTLHS LPAYAGDAPS 60 PKGKSPSPRH LQRSSPRSNP SGSASSGGKH PFYRGIRSRS GKWVSEIREP RKTTRVWLGT 120 YPTPEM |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010054789.1 | 1e-79 | PREDICTED: ethylene-responsive transcription factor ERF025 | ||||
TrEMBL | A0A059CI54 | 2e-78 | A0A059CI54_EUCGR; Uncharacterized protein | ||||
STRING | XP_010054789.1 | 4e-79 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1957 | 27 | 77 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 4e-19 | ERF family protein |