PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS670990.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | HSF | ||||||||
Protein Properties | Length: 157aa MW: 18135.3 Da PI: 4.9511 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 64.2 | 3e-20 | 69 | 117 | 12 | 60 |
TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 12 deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 +++ +++isw+++g+ fvv+ + ef++++LpkyFkh+nf+SF+RQLn+Y EcS670990.10 69 KKKKRKMISWNREGSGFVVWCPAEFSEHMLPKYFKHNNFSSFIRQLNTY 117 44899******************************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.10 | 2.9E-22 | 21 | 119 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SMART | SM00415 | 3.6E-7 | 27 | 148 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
Pfam | PF00447 | 8.9E-17 | 69 | 117 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
SuperFamily | SSF46785 | 7.48E-15 | 73 | 117 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MAAREEVSEQ NSNLQSTSRS TSPRTRGPAP FLLKTFDLLE EAGGDDLGEE EEEEEEEEDD 60 DGDGEGMMKK KKRKMISWNR EGSGFVVWCP AEFSEHMLPK YFKHNNFSSF IRQLNTYVSL 120 SLSLSLSRSL SLWIRCMRSG LICRFHLPRF LEGTRWT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 68 | 73 | KKKKRK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010052317.1 | 1e-46 | PREDICTED: heat stress transcription factor B-2a | ||||
TrEMBL | A0A059CCQ3 | 3e-45 | A0A059CCQ3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010052316.1 | 4e-46 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM965 | 28 | 111 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11660.1 | 7e-19 | HSF family protein |