PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS660768.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NF-YB | ||||||||
Protein Properties | Length: 40aa MW: 4483.06 Da PI: 4.1529 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 28.2 | 4.6e-09 | 1 | 38 | 50 | 87 |
NF-YB 50 asdkcqrekrktingddllwalatlGfedyveplkvyl 87 a+d c++ kr+tin+dd+l al ++ f +++ pl++ l EcS660768.10 1 ANDICKESKRQTINADDVLKALEEMEFPEFMGPLRASL 38 7999*****************************98766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.20.10 | 7.2E-13 | 1 | 39 | IPR009072 | Histone-fold |
SuperFamily | SSF47113 | 7.94E-12 | 1 | 39 | IPR009072 | Histone-fold |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 40 aa Download sequence Send to blast |
ANDICKESKR QTINADDVLK ALEEMEFPEF MGPLRASLDG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010031521.1 | 1e-20 | PREDICTED: DNA polymerase epsilon subunit D | ||||
TrEMBL | A0A059A9S3 | 3e-19 | A0A059A9S3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010031521.1 | 5e-20 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 4e-14 | nuclear factor Y, subunit B11 |