PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS607143.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 185aa MW: 21139.2 Da PI: 9.1755 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.9 | 2.3e-10 | 75 | 180 | 3 | 96 |
EE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTH.HHHHHHHT--TT-EEEEEE-S CS B3 3 kvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltled.esgrsWevkliyrkksgryvltkGW.keFvkangLkegDfvvFkldg 86 k lt+sd + ++rl + ++ +++h + ++ ++ +++++d +g + ++ + ++ +sg y l++GW keFvk L++gD v ++ + EcS607143.10 75 KRLTQSDLGHLSRLLIGRDLVKSHflrwmdeetvrQVESGKGADVIVRDmDTGSEHRLVFVFWTSSGCYALKGGWiKEFVKRRALEVGDEVGIY--W 169 889*************************9988887555568999*****8899999999999*************999**************99..6 PP S.SEE..EEEE CS B3 87 r.sefelvvkv 96 + se+++++++ EcS607143.10 170 DpSERKFHFSL 180 66777777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 1.4E-14 | 73 | 179 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.75E-15 | 73 | 179 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 7.14E-17 | 74 | 181 | No hit | No description |
Pfam | PF02362 | 1.7E-7 | 75 | 179 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
LDQNTKEVSR PRREVVPAQP KRKSTASLTN AESLIAEKKA KCERTQKGKK EASGCDAEEV 60 STELTLVFDP YKVKKRLTQS DLGHLSRLLI GRDLVKSHFL RWMDEETVRQ VESGKGADVI 120 VRDMDTGSEH RLVFVFWTSS GCYALKGGWI KEFVKRRALE VGDEVGIYWD PSERKFHFSL 180 LHMVD |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058716.1 | 1e-110 | PREDICTED: uncharacterized protein LOC104446575 | ||||
TrEMBL | A0A059C5M0 | 1e-111 | A0A059C5M0_EUCGR; Uncharacterized protein | ||||
STRING | XP_010041366.1 | 1e-128 | (Eucalyptus grandis) | ||||
STRING | XP_010058726.1 | 1e-128 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM456 | 9 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33720.1 | 5e-28 | B3 family protein |