PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS597400.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family TCP
Protein Properties Length: 134aa    MW: 14884.5 Da    PI: 9.8734
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS597400.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP55.32.7e-17100134236
           TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLq 36 
                   ++k+++++++hTkv+gR+RR+R++a+caar+F+L+
  EcS597400.10 100 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLT 134
                   789*******************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.2E-12104134IPR005333Transcription factor, TCP
PROSITE profilePS5136915.875106134IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
IMEGGDHDHF HHHHHHHHHH RRPTFPFQLL EKKEDEQPCS TSNYPSLAMS SDDAPPNPNR  60
SSSTSNTLQI VPAEDQQQQQ QQTLAAAAAG AGAAGAKKPP PKRTSTKDRH TKVDGRGRRI  120
RMPALCAARV FQLT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029552.11e-58PREDICTED: transcription factor TCP14
TrEMBLA0A059D0383e-57A0A059D038_EUCGR; Uncharacterized protein
STRINGXP_010029552.15e-58(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM39152757
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.12e-20TCP family protein