PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS597400.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | TCP | ||||||||
Protein Properties | Length: 134aa MW: 14884.5 Da PI: 9.8734 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 55.3 | 2.7e-17 | 100 | 134 | 2 | 36 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLq 36 ++k+++++++hTkv+gR+RR+R++a+caar+F+L+ EcS597400.10 100 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLT 134 789*******************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 1.2E-12 | 104 | 134 | IPR005333 | Transcription factor, TCP |
PROSITE profile | PS51369 | 15.875 | 106 | 134 | IPR017887 | Transcription factor TCP subgroup |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence Send to blast |
IMEGGDHDHF HHHHHHHHHH RRPTFPFQLL EKKEDEQPCS TSNYPSLAMS SDDAPPNPNR 60 SSSTSNTLQI VPAEDQQQQQ QQTLAAAAAG AGAAGAKKPP PKRTSTKDRH TKVDGRGRRI 120 RMPALCAARV FQLT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010029552.1 | 1e-58 | PREDICTED: transcription factor TCP14 | ||||
TrEMBL | A0A059D038 | 3e-57 | A0A059D038_EUCGR; Uncharacterized protein | ||||
STRING | XP_010029552.1 | 5e-58 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3915 | 27 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69690.1 | 2e-20 | TCP family protein |