PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS553919.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 48aa MW: 5505.31 Da PI: 5.6982 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 45.8 | 1.3e-14 | 1 | 28 | 29 | 56 |
G2-like 29 PktilelmkvkgLtlehvkSHLQkYRla 56 Pktil+lm+v+gLtle+v+SHLQ YRl+ EcS553919.10 1 PKTILQLMNVDGLTLENVASHLQEYRLY 28 9*************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.0E-14 | 1 | 32 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.2E-10 | 1 | 27 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 3.4E-7 | 1 | 31 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 48 aa Download sequence Send to blast |
PKTILQLMNV DGLTLENVAS HLQEYRLYLQ RMQGPSRGPD ELPSRPLE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010059205.2 | 2e-25 | PREDICTED: uncharacterized protein LOC104447127 | ||||
Refseq | XP_010059306.2 | 2e-25 | PREDICTED: uncharacterized protein LOC104447241 | ||||
STRING | XP_010059205.1 | 1e-24 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46640.2 | 1e-15 | G2-like family protein |