PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS532141.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 160aa MW: 16668.5 Da PI: 7.9948 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.4 | 1.2e-20 | 12 | 62 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +ykGVr +k +g+WvAeIr p++ r r++lg++ taeeAa+a++aa ++l+g+ EcS532141.10 12 RYKGVRMRK-WGKWVAEIRQPNS---RDRIWLGSYATAEEAARAYDAAVLCLRGP 62 7******99.**********933...5*************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.62E-29 | 12 | 71 | No hit | No description |
Pfam | PF00847 | 2.0E-14 | 12 | 61 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.7E-31 | 12 | 70 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.4E-37 | 12 | 75 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.367 | 12 | 69 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.75E-23 | 12 | 70 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.0E-9 | 13 | 24 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-9 | 35 | 51 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
DAVLPRAHHR HRYKGVRMRK WGKWVAEIRQ PNSRDRIWLG SYATAEEAAR AYDAAVLCLR 60 GPTALLNFPD LPPEIPSSAA AGGGGVSASQ VQMAAARHAH GGRAATAAET STCSGGEPCG 120 SSSPDVLQIA ANSSGGGEDI SRFATDGCYL GTEHGVQVNS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 7e-17 | 12 | 69 | 14 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010050434.2 | 1e-111 | PREDICTED: ethylene-responsive transcription factor RAP2-9 | ||||
Swissprot | Q9C591 | 3e-34 | ERF16_ARATH; Ethylene-responsive transcription factor ERF016 | ||||
TrEMBL | A0A059CLV6 | 1e-111 | A0A059CLV6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010050434.1 | 1e-112 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 1e-23 | ERF family protein |