PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS513387.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | MYB_related | ||||||||
Protein Properties | Length: 74aa MW: 8514.65 Da PI: 8.505 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.5 | 2.3e-11 | 14 | 45 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT++Ed++l+d+++++G g+W++ ++ g EcS513387.10 14 KGAWTKQEDQKLIDYIHKHGEGCWRSLPQAAG 45 79***********************9998766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.3E-11 | 6 | 43 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 9.195 | 9 | 56 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 3.04E-8 | 11 | 45 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 9.7E-10 | 14 | 45 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 1.69E-6 | 16 | 46 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 74 aa Download sequence Send to blast |
MRKPCCEKKG TMNKGAWTKQ EDQKLIDYIH KHGEGCWRSL PQAAGTFVHE FLHFSSPRRF 60 ETAVGPETYV TSET |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By nitrogen, salicylic acid, NaCl and abscisic acid (ABA). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:18541146, ECO:0000269|PubMed:9839469}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010032675.1 | 4e-27 | PREDICTED: transcription factor MYB3 | ||||
Swissprot | Q9S9K9 | 9e-19 | MYB3_ARATH; Transcription factor MYB3 | ||||
TrEMBL | A0A059D087 | 9e-26 | A0A059D087_EUCGR; Uncharacterized protein | ||||
STRING | XP_010032675.1 | 2e-26 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4 | 28 | 2646 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 4e-21 | myb domain protein 3 |