PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS512627.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 273aa    MW: 30020.1 Da    PI: 4.2329
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS512627.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS27.83.1e-09213268257
          GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsv 57 
                    e Ll++Ae v  +++ +a+ lL +  el+ ++g+p++R++ yf eAL++++ r++
  EcS512627.10 213 AEILLAAAEKVGCQQFDAASVLLDQCDELCCSTGNPVERVVYYFSEALREKIDRET 268
                   578************************************************99855 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035141.1E-6213268IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MASSASDSAE HSFSEVEDRL SSSSQSYGGV IAGEGSQAPF SKTKDWGESE DISSFSDYRI  60
HHSELTRKQA LFSENQQQEQ LQQFFSDYGL LNNLQCNAAS LPIQTCLDEI NKFARISTEL  120
QDIDEAGKDK PFQISLSSLE LLRNDGSGFK QLAGDGVLKP HTEHRQVELS TSETMMIASA  180
KYIQSSSGAG DDLALPDDFS CLSEDKIRNV QLAEILLAAA EKVGCQQFDA ASVLLDQCDE  240
LCCSTGNPVE RVVYYFSEAL REKIDRETGR ISI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064972.11e-174PREDICTED: DELLA protein RGL1
TrEMBLA0A059DBM41e-160A0A059DBM4_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010064972.11e-173(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.15e-07GRAS family protein