PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC066484.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 75aa MW: 8773.96 Da PI: 11.3066 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.1 | 1.6e-16 | 33 | 74 | 2 | 47 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47 y+G+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ EcC066484.10 33 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPIAAARAYD 74 6******99.**********9...336******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 4.51E-15 | 33 | 74 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 2.2E-13 | 33 | 75 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.584 | 33 | 75 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.0E-9 | 34 | 45 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.7E-22 | 34 | 75 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.8E-10 | 34 | 74 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.10E-16 | 34 | 74 | No hit | No description |
PRINTS | PR00367 | 8.0E-9 | 56 | 72 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0001078 | Molecular Function | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 75 aa Download sequence Send to blast |
MEGEFFTATP TPTATGTTAE KRKQRQQQNR EKPYRGIRMR KWGKWVAEIR EPNKRSRIWL 60 GSYTTPIAAA RAYDT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022143655.1 | 7e-33 | ethylene-responsive transcription factor ERF011-like | ||||
Swissprot | Q9SW63 | 3e-26 | RA210_ARATH; Ethylene-responsive transcription factor RAP2-10 | ||||
TrEMBL | A0A125R6G9 | 5e-31 | A0A125R6G9_BETPL; ERF11 | ||||
TrEMBL | A0A2N9H6F9 | 6e-31 | A0A2N9H6F9_FAGSY; Uncharacterized protein | ||||
STRING | POPTR_0002s12550.1 | 2e-30 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36900.1 | 8e-25 | related to AP2 10 |
Publications ? help Back to Top | |||
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