PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC056917.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 284aa    MW: 31627.6 Da    PI: 5.2446
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC056917.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.9e-19151202155
           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   ++y+GVr+++ +g+++AeIrdp++ng  +r +lg++ t+++Aa a+++a+ k++g
  EcC056917.10 151 THYRGVRRRP-WGKYAAEIRDPKKNG--ARMWLGTYKTPQDAALAYDRAAFKIKG 202
                   68********.***********9998..************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.39E-30151210No hitNo description
PfamPF008471.9E-12151202IPR001471AP2/ERF domain
SuperFamilySSF541714.05E-22152211IPR016177DNA-binding domain
SMARTSM003801.5E-36152216IPR001471AP2/ERF domain
PROSITE profilePS5103223.222152210IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-30152210IPR001471AP2/ERF domain
PRINTSPR003675.9E-13153164IPR001471AP2/ERF domain
PRINTSPR003675.9E-13192212IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MLQEIIGPFQ VDQFDVLKSI CDHLLQDDGD SFSTTYAAPS PANMYSRSSS FGNLLPTENS  60
SELSPKVDDS EDMLVYGALH DALNSRWTIP LASNQELGFK VTAIDDNSNG LALNQELDFE  120
VTAIDYDAID LVTEKKPKTV EHGVQGPVEK THYRGVRRRP WGKYAAEIRD PKKNGARMWL  180
GTYKTPQDAA LAYDRAAFKI KGSKAKLNFP LLIGSAEYEP VRVNPKRRSA EPRSLSTSID  240
DGLTKRTKKR KGEINVDAEV DFGNPIPFHV LEMGILSGDE QFLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-31152217570ATERF1
3gcc_A8e-31152217570ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018733020.10.0PREDICTED: ethylene-responsive transcription factor 13-like
TrEMBLA0A059BAV21e-117A0A059BAV2_EUCGR; Uncharacterized protein
STRINGXP_010068070.11e-167(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-58ethylene-responsive element binding factor 13