PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC055202.130
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Dof
Protein Properties Length: 266aa    MW: 28739.6 Da    PI: 5.5712
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC055202.130genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.91.9e-372883661
         zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    +cprC s++tkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn+++
  EcC055202.130 28 PSCPRCASSHTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKNRRT 83
                   68***************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088428.6022882IPR003851Zinc finger, Dof-type
PfamPF027018.7E-322882IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103066IPR003851Zinc finger, Dof-type
ProDomPD0074782.0E-213782IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0006904Biological Processvesicle docking involved in exocytosis
GO:0016567Biological Processprotein ubiquitination
GO:0046836Biological Processglycolipid transport
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004672Molecular Functionprotein kinase activity
GO:0004842Molecular Functionubiquitin-protein transferase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0008270Molecular Functionzinc ion binding
GO:0017089Molecular Functionglycolipid transporter activity
GO:0051861Molecular Functionglycolipid binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MFAPSSDQAA LFQRWGTSSH GGVHAAAPSC PRCASSHTKF CYYNNYSLSQ PRYFCKSCRR  60
YWTKGGSLRN VPVGGGCRKN RRTRPSSRSQ APASGQPERA SLAGGQPDSV DKDQSVESPQ  120
SGSPATAAGA LDIDMVAVFA KFLNNEQTKS CSQELTGSTS SAVTPDSVQT AASLDLVEEQ  180
AEPPPEVPHA EGLFTETNGF HHQESSADDL LWVDTTSCLA NFAWQPMVQL QEIGTPPADD  240
HFRLLPTNDN FWSSFDLAGF ELSSRP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064809.10.0PREDICTED: dof zinc finger protein DOF1.2
TrEMBLA0A059BT940.0A0A059BT94_EUCGR; Uncharacterized protein
STRINGXP_010064809.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.11e-31Dof family protein