PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC055202.130 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Dof | ||||||||
Protein Properties | Length: 266aa MW: 28739.6 Da PI: 5.5712 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 118.9 | 1.9e-37 | 28 | 83 | 6 | 61 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC s++tkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn+++ EcC055202.130 28 PSCPRCASSHTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKNRRT 83 68***************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50884 | 28.602 | 28 | 82 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 8.7E-32 | 28 | 82 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 30 | 66 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 2.0E-21 | 37 | 82 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005975 | Biological Process | carbohydrate metabolic process | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0006904 | Biological Process | vesicle docking involved in exocytosis | ||||
GO:0016567 | Biological Process | protein ubiquitination | ||||
GO:0046836 | Biological Process | glycolipid transport | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005524 | Molecular Function | ATP binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0017089 | Molecular Function | glycolipid transporter activity | ||||
GO:0051861 | Molecular Function | glycolipid binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence Send to blast |
MFAPSSDQAA LFQRWGTSSH GGVHAAAPSC PRCASSHTKF CYYNNYSLSQ PRYFCKSCRR 60 YWTKGGSLRN VPVGGGCRKN RRTRPSSRSQ APASGQPERA SLAGGQPDSV DKDQSVESPQ 120 SGSPATAAGA LDIDMVAVFA KFLNNEQTKS CSQELTGSTS SAVTPDSVQT AASLDLVEEQ 180 AEPPPEVPHA EGLFTETNGF HHQESSADDL LWVDTTSCLA NFAWQPMVQL QEIGTPPADD 240 HFRLLPTNDN FWSSFDLAGF ELSSRP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010064809.1 | 0.0 | PREDICTED: dof zinc finger protein DOF1.2 | ||||
TrEMBL | A0A059BT94 | 0.0 | A0A059BT94_EUCGR; Uncharacterized protein | ||||
STRING | XP_010064809.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52440.1 | 1e-31 | Dof family protein |