PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC054924.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 259aa MW: 29112.9 Da PI: 4.4513 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.2 | 9.1e-30 | 26 | 84 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d +v+++tY+++Hnh+ EcC054924.10 26 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCKTDASVLVVTYTSTHNHP 84 699***********************9988****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.5E-31 | 15 | 86 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 6.93E-26 | 21 | 86 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.0E-34 | 25 | 85 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.779 | 26 | 86 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.9E-25 | 27 | 84 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006508 | Biological Process | proteolysis | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0004252 | Molecular Function | serine-type endopeptidase activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
KLVHKTVVRV KIEANVVKQK NEGPPSDFWS WRKYGQKPIK GSPYPRGYYR CSTSKGCSAK 60 KQVERCKTDA SVLVVTYTST HNHPGPDIHS LNPTVQPSEA DDDPEETAVA VAVSPAVSAQ 120 EEVPEQDQED QDQEQHLDLG DKQDRDRHTH VTIDEADRAR EDNFHYLRSP TNCSSQDLVM 180 EQDDTLAPQL QVYEEPLVSC SREDPSGVGA APVPPEPEPE PEEGHDFFDE LEELPAFSYF 240 ANLNRINHFI DDRIPVVPS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 8e-21 | 26 | 86 | 17 | 79 | Disease resistance protein RRS1 |
5w3x_D | 8e-21 | 26 | 86 | 17 | 79 | Disease resistance protein RRS1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010069834.1 | 1e-161 | PREDICTED: probable WRKY transcription factor 68 | ||||
TrEMBL | A0A059AY08 | 1e-160 | A0A059AY08_EUCGR; Uncharacterized protein | ||||
STRING | XP_010069834.1 | 1e-161 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM15371 | 11 | 17 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 8e-33 | WRKY DNA-binding protein 35 |