PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC054881.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 147aa MW: 16978.3 Da PI: 9.5942 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 75.9 | 9.3e-24 | 6 | 131 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 pGf F+Ptd+el ++yL +++++++l+ +vi+++d+y ePw++ k + + y F+ +kk + +r r++ sg Wk+ + + + +g+ EcC054881.30 6 PGFCFQPTDQELFSDYLMRRLKEEPLPDPNVIRDCDVYGGgEPWKIFD--KDRGGKFYVFTVLKKK--NRSRVDRTAGSGSWKEEQS-SDFRDLQGH 97 9*************************9999********866*****62..2334466777777666..578************9877.55555599* PP NAM 99 lvglkktLvfy.....kgrapkgektdWvmheyr 127 ++g kk ++f +++a k+e+ +W+m ey+ EcC054881.30 98 VIGYKKLFTFKpkagsSAKADKAENGHWIMYEYS 131 ***********98776679999999********7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.413 | 4 | 147 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.88E-22 | 5 | 134 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.5E-16 | 6 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MATRHPGFCF QPTDQELFSD YLMRRLKEEP LPDPNVIRDC DVYGGGEPWK IFDKDRGGKF 60 YVFTVLKKKN RSRVDRTAGS GSWKEEQSSD FRDLQGHVIG YKKLFTFKPK AGSSAKADKA 120 ENGHWIMYEY SKHPRNVSVS FPLSLFC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 4e-13 | 6 | 130 | 17 | 138 | Stress-induced transcription factor NAC1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010058231.1 | 8e-95 | PREDICTED: NAC domain-containing protein 72-like | ||||
STRING | XP_010058231.1 | 3e-94 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 1e-14 | NAC domain containing protein 32 |