PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054802.230
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 444aa    MW: 48122.4 Da    PI: 8.2095
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054802.230genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.2e-10261285125
                    XXXXCHHHCHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKk 25 
                    e+elkrerrkq+NRe+ArrsR+RK+
  EcC054802.230 261 ERELKRERRKQSNRESARRSRLRKQ 285
                    89**********************9 PP
2bZIP_129.41.7e-093233612563
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    +ae+eeL++kv++L+aeN+aLk+e+++l+++++kl+ e+
  EcC054802.230 323 QAETEELAKKVDSLSAENRALKSEISRLTENSDKLRLEN 361
                    89*********************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077777.6E-34195IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.8E-11114232No hitNo description
Gene3DG3DSA:1.20.5.1703.7E-14255285No hitNo description
SMARTSM003386.6E-9261363IPR004827Basic-leucine zipper domain
PfamPF001709.8E-8261286IPR004827Basic-leucine zipper domain
CDDcd147024.04E-12266355No hitNo description
PROSITE patternPS000360268283IPR004827Basic-leucine zipper domain
PfamPF001703.6E-7323361IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.7E-14324358No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006032Biological Processchitin catabolic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006412Biological Processtranslation
GO:0006887Biological Processexocytosis
GO:0007020Biological Processmicrotubule nucleation
GO:0031122Biological Processcytoplasmic microtubule organization
GO:0048278Biological Processvesicle docking
GO:0000930Cellular Componentgamma-tubulin complex
GO:0005840Cellular Componentribosome
GO:0032040Cellular Componentsmall-subunit processome
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0003924Molecular FunctionGTPase activity
GO:0004568Molecular Functionchitinase activity
GO:0005515Molecular Functionprotein binding
GO:0016853Molecular Functionisomerase activity
GO:0030246Molecular Functioncarbohydrate binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MGNNEETKSS KSDKSSSPVP LDQTGVHVYH PDWAAMHAYY GPRVALPPYY NSAVSSGHGP  60
HPYMWGPPQP MMPPYGPPYA AIYSHGGVYG HPAIPLTPTP LAAETPKKSS ANSDNGLVKK  120
LKSFEGLAMS IGSGGDADSA DDGTDKRSSQ SADSGDSSDG DQSGADKARR KRSREGTSSN  180
GDGKSEVQGK VAREVDAASE NVSGGAIERP RATGKLAAPV NSPSMSSSSL DLKNSCMDAN  240
ANPLSILQPG VVPPEAWLQN ERELKRERRK QSNRESARRS RLRKQVWMTC DRKCYRAVFS  300
LSVCHFHQRV CHLKGMDFPL NVQAETEELA KKVDSLSAEN RALKSEISRL TENSDKLRLE  360
NATLMERLEN AQGVEKAVES LGKFNDNGLL SDKTENLLSR VNNSGAVDRR SEDEGEIYER  420
KSNSSAKLHQ LLDSKPRTDA VAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1277283RRSRLRK
2277284RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055061.20.0PREDICTED: common plant regulatory factor 1 isoform X2
TrEMBLA0A059C0130.0A0A059C013_EUCGR; Uncharacterized protein
STRINGXP_010055062.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.13e-75G-box binding factor 3