PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC053395.20 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Nin-like | ||||||||
Protein Properties | Length: 305aa MW: 33737.7 Da PI: 4.7564 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 61.4 | 1.6e-19 | 261 | 305 | 4 | 48 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 +++l d+ yF+lpi++A+ L +c+Tv+K+iCR+ G+ RWP+Rk EcC053395.20 261 KMTLADVGGYFHLPIEKASERLHLCPTVVKKICRKGGVGRWPYRK 305 7899****************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 14.823 | 247 | 305 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 5.8E-17 | 261 | 305 | IPR003035 | RWP-RK domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006807 | Biological Process | nitrogen compound metabolic process | ||||
GO:0016810 | Molecular Function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence Send to blast |
MADPKAAAPG SESDDDLFGD DYLKYLLPNP DPGLEDDMPP LDLQLALKSD ENTPLPVDEI 60 GDPDPFDDPA VWHLFNRGHG DGNNGAGSSH AGPSGTSSGG TEDCYYSQPE DWNYSVPRVL 120 PNWPAPPLPY NCSCCQVLRE IIHTHVETNH TTKLELHGRV GMVSHAILDT QHNPGAVPSN 180 GEDRYQMFDF CKKSIQNVKD FLQQYCEGRR LAGYIMYQDP LAMFYEAVCV GIDFNGNVNA 240 DYFQLPLPPT VSGDARERAG KMTLADVGGY FHLPIEKASE RLHLCPTVVK KICRKGGVGR 300 WPYRK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | XP_010050417.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 3e-08 | Nin-like family protein |