PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC051768.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 105aa    MW: 12495.5 Da    PI: 9.9595
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC051768.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS71.81.3e-228103279374
          GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   +e+++ +E+++lgre+ n +a+eg er+er e++++W+ r ++aGF +vpls + a+ +   ++  + + + v+e  ++l+l Wk+r L+++S W+
  EcC051768.20   8 HENQVLIEKVMLGREALNTIATEGWERVERPESYKQWQLRNMRAGFVQVPLSRRLAQFVFNNIASRYHKDFVVDEVGKWLLLEWKGRFLYAFSTWK 103
                   567899**********************************************998776655555555466*************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098512.582183IPR005202Transcription factor GRAS
PfamPF035144.4E-208103IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
MLDTIVPHEN QVLIEKVMLG REALNTIATE GWERVERPES YKQWQLRNMR AGFVQVPLSR  60
RLAQFVFNNI ASRYHKDFVV DEVGKWLLLE WKGRFLYAFS TWKPA
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010039209.11e-61PREDICTED: scarecrow-like protein 9
RefseqXP_010042112.17e-60PREDICTED: scarecrow-like protein 9
SwissprotO809332e-33SCL9_ARATH; Scarecrow-like protein 9
TrEMBLA0A059A6776e-60A0A059A677_EUCGR; Uncharacterized protein (Fragment)
TrEMBLA0A059A7783e-58A0A059A778_EUCGR; Uncharacterized protein
STRINGXP_010039209.15e-61(Eucalyptus grandis)
STRINGXP_010042112.13e-59(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.17e-36GRAS family protein