PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC051765.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 140aa    MW: 15981.4 Da    PI: 8.3262
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC051765.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.92.4e-1022117385
                   EE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHH.HHHHHT--TT-EEEEEE- CS
            B3   3 kvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltled.esgrsWevkliyrkksgryvltkGWke.FvkangLkegDfvvFkld 85 
                   k+lt+sd  +++rl l ++++++h           + +++e++++ + +  +g + ++ ++y+ +sg yvl +GW + Fv+  +L++gD +  + d
  EcC051765.10  22 KKLTRSDLDQLSRLLLRRDCVKAHvlqwmkkeivgKVESKEGMEVDVINeDTGGEHRLVFRYWASSGCYVLNGGWTKlFVHGGELNVGDKIGMYWD 117
                   99**************************9999997444458899999994556888888888*************8769**********9887755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019364.71E-1416131IPR015300DNA-binding pseudobarrel domain
CDDcd100175.66E-1418128No hitNo description
Gene3DG3DSA:2.40.330.102.5E-1520137IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.002120131IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009685Biological Processgibberellin metabolic process
GO:0055114Biological Processoxidation-reduction process
GO:0003677Molecular FunctionDNA binding
GO:0052635Molecular FunctionC-20 gibberellin 2-beta-dioxygenase activity
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
RNISSDVSTE LVFYDDPWKI RKKLTRSDLD QLSRLLLRRD CVKAHVLQWM KKEIVGKVES  60
KEGMEVDVIN EDTGGEHRLV FRYWASSGCY VLNGGWTKLF VHGGELNVGD KIGMYWDTIS  120
CKFHFIVLQK VACGTSNPAA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041786.14e-90PREDICTED: gibberellin 2-beta-dioxygenase 8-like
TrEMBLA0A059C5G95e-74A0A059C5G9_EUCGR; Uncharacterized protein
STRINGXP_010041786.12e-89(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.11e-20B3 family protein