PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC051401.40
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 327aa    MW: 36762.9 Da    PI: 10.5474
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC051401.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.51.3e-075294347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT +E+e +  a +q G++ +++I  +++  +   q++++++ +
     EcC051401.40 52 AWTRQEEESFFAALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 94
                     6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.96E-104599IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-54697IPR009057Homeodomain-like
PROSITE profilePS5129312.0244899IPR017884SANT domain
SMARTSM007171.9E-44997IPR001005SANT/Myb domain
CDDcd001679.51E-55295No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006096Biological Processglycolytic process
GO:0006400Biological ProcesstRNA modification
GO:0003677Molecular FunctionDNA binding
GO:0004618Molecular Functionphosphoglycerate kinase activity
GO:0008176Molecular FunctiontRNA (guanine-N7-)-methyltransferase activity
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MQSEVQIPLN SETNPHPESH VTQDGGAGLT ASTMDPVLTQ QPAKRPTRQW AAWTRQEEES  60
FFAALRQVGK NFEKITCRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHQLLKDRK KNVRKRSQGE NCSSPSTISS  180
HGRTSGHDNR AVRLVLVDNQ NIQKLGSGKP PLKRPVNVGV HRSNGKVESP TMKPARQRRK  240
PGGALSSAAY KKWEKAAIAG VSLVADAAEH LERTAVSKEV ENDQCIPKEN GSDHTEEDLP  300
PPPCFSKNQF AESSLQASMK LKLQLFP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010050972.10.0PREDICTED: TSL-kinase interacting protein 1
SwissprotQ8LJT81e-116TKI1_ARATH; TSL-kinase interacting protein 1
TrEMBLA0A059DF810.0A0A059DF81_EUCGR; Uncharacterized protein
STRINGXP_010050972.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM96332124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.21e-119TSL-kinase interacting protein 1