PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC051147.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family TCP
Protein Properties Length: 336aa    MW: 35008.9 Da    PI: 9.6094
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC051147.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP113.62.7e-35741753103
           TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa.ks 97 
                   + +++++++hTkv+gR+RR+R++a caar+F+L++eLG++ d++t+ WLl+ a+ ai+e+tgt++ +a ++   +   +   ++ss++++  ++ k+
  EcC051147.20  74 PPRRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKNDGETVRWLLEHAENAIIEATGTGTVPAIAVsV-GGTLKIPTTPSSSSKEDGDPpKK 169
                   66899**********************************************************8888844421.11111111112222222222122 PP

           TCP  98 kksqks 103
                   k++++s
  EcC051147.20 170 KRNRAS 175
                   222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136926.30579133IPR017887Transcription factor TCP subgroup
PfamPF036346.0E-2979163IPR005333Transcription factor, TCP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006979Biological Processresponse to oxidative stress
GO:0055114Biological Processoxidation-reduction process
GO:0003677Molecular FunctionDNA binding
GO:0004601Molecular Functionperoxidase activity
GO:0005506Molecular Functioniron ion binding
GO:0016614Molecular Functionoxidoreductase activity, acting on CH-OH group of donors
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037Molecular Functionheme binding
GO:0031418Molecular FunctionL-ascorbic acid binding
GO:0046983Molecular Functionprotein dimerization activity
GO:0050660Molecular Functionflavin adenine dinucleotide binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MESTQNRDAD VEDDVNRDQR SAREISPPEP PRVRNGFLKE ELANSDPERE ALLAPGGGSQ  60
VSLSSPRFQR AVAPPRRPSK DRHTKVEGRG RRIRMPAACA ARIFQLTREL GHKNDGETVR  120
WLLEHAENAI IEATGTGTVP AIAVSVGGTL KIPTTPSSSS KEDGDPPKKK RNRASKSDFF  180
DAREPVSTRS GFAPITYCSG GGGLSHGLMQ LWPVGTPNGG GSGGGGGGTV FVLPPGSSGQ  240
TQPSFLAIPP IFQVGARPIS TSTTSPTGGG DGGSTEASTV APSSSSPVAA SAVSGSTSSG  300
APHMLKDFSL EIYDRKELQF LGRSPNSPPS SSCSKP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010025203.10.0PREDICTED: transcription factor TCP19
SwissprotQ9LT897e-61TCP19_ARATH; Transcription factor TCP19
TrEMBLA0A059DK670.0A0A059DK67_EUCGR; Uncharacterized protein
STRINGXP_010025203.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.21e-57TCP family protein