PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC050906.60
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 394aa    MW: 43808.7 Da    PI: 4.5043
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC050906.60genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-184594255
           AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  ++ GVr+++ +grWvAeI+d      ++ r++lg+f++aeeAa+a+++a+  l+g
  EcC050906.60 45 RFIGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDSAEEAARAYDEAACLLRG 94
                  689******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.70E-3044101No hitNo description
PROSITE profilePS5103219.20345102IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-2645101IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-1945102IPR016177DNA-binding domain
PfamPF008473.5E-134594IPR001471AP2/ERF domain
SMARTSM003802.0E-3345108IPR001471AP2/ERF domain
PRINTSPR003672.2E-74657IPR001471AP2/ERF domain
PRINTSPR003672.2E-76884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006886Biological Processintracellular protein transport
GO:0016192Biological Processvesicle-mediated transport
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MARKRKSVEP MPESNPSEET VTWDQMVKEA AAVAALGGAQ RAQKRFIGVR QRPSGRWVAE  60
IKDTIQKIRV WLGTFDSAEE AARAYDEAAC LLRGANTRTN FWPCSPSASS SPALPSKVTN  120
LLLQRLKARK TSLALTSDGL SYQEQKQPKE ELMPEVTGFS EIQFSDYLTD PEDCTAEQNF  180
INDAITSHYV TNSESSFNFQ EDSGWRAGKE KHCDYSMSDV TQSYSDDGIL GRDGVEDADL  240
RVLDLQFLDK FRPSCYYSPF EIAEEIVEPM EPENDGEEPP ILTAAMKRMT FERKYSASLY  300
AFNGVRECLK LQLGSRTAMA RAHSNELAKL QNACDKKKDE DKPVGDGFLK VMAEEENPET  360
PTDTIASSSS SSSSNEGESS LWSSLDLPTI CSVN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029367.20.0PREDICTED: ethylene-responsive transcription factor ERF118
TrEMBLA0A059AQZ10.0A0A059AQZ1_EUCGR; Uncharacterized protein
STRINGXP_010029367.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-21related to AP2 11