PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC050553.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Trihelix
Protein Properties Length: 1009aa    MW: 110779 Da    PI: 7.0869
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC050553.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.92.9e-092152742181
      trihelix  21 lrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                    +rgk ++ + +ev++++ ++g++r +k+   kw+n+ ++++k+ e+e++++ e++   +y
  EcC050553.10 215 PGRGKTRAEKDREVAEFLNRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQV-GKSY 274
                   56889999999**************************************9965555.3445 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.510.105.5E-6834951No hitNo description
SuperFamilySSF561121.19E-15844994IPR011009Protein kinase-like domain
CDDcd001805.87E-13855990No hitNo description
Gene3DG3DSA:1.10.510.108.2E-4960995No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0055085Biological Processtransmembrane transport
GO:0016021Cellular Componentintegral component of membrane
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0022891Molecular Functionsubstrate-specific transmembrane transporter activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 1009 aa     Download sequence    Send to blast
MADNKGAGDT PKKPQQPPPP PPPQISASPT EETTPTDPRP PPPPSPAVVV TGATPFISAP  60
FFDQHHSQFE AVSGTNPKRP RFGVGQWKLL TSPPESSPSP TTHPNPNPQA HATTASSSDT  120
ASSPTQSPIT SVPTTTSSQE TSKLEGGGDQ QQFQTHHQFR KGKYVSPVWK PNEMLWLARA  180
WRVQYQGGGG GGSSSDSRID QNPAAGGGDA AAAAPGRGKT RAEKDREVAE FLNRHGVNRD  240
AKTAGTKWDN MLGEFRKVYE WERGGEREQV GKSYFRLSPY ERKVYRLPAS FDEEVFEELA  300
QFMGPRMRTT GQSRVSPVFA DDSGGIVRAL PPPPPPYRDD DPSLLTARTK QLVMSSGVEA  360
SSYYVSRGGG GGGGGGGGGL FLGFEPSPLD VGSGPSASSA LREIRRIGKI RMTWEESVSL  420
WAEEGEHHRG RVRLQGSSFL NADELTFFDD SMVACTMEAF EDGALRGFSV DRFIPGQQVK  480
VFGRRKSSSS SVAASSTASG FQERVQLPLP EPSLRIPPWE LQDPTEYYIG CLRVPPTTLP  540
TLFELSWYLQ EPPPEELRLP LRRDVYRDLP PGKELFFTTS HELLDSRSFT MDILSSIIRT  600
NPSLTSSTAT SRDSYIGLWD DCLNRIVSKF CSVEMVMIRK PSVATAEVAL QDQWPNLTGF  660
VRNFCLWRGE ETDQVREGQL DPSSSIIEKL MWTYMDLPYI LGYFAVGHTV TFCALSRSQD  720
ARVVRTDLYK LDLSSQADRL KALVPCYRVA GLLSLLADRC FDNMNANVVN YKNSIFPYSD  780
FERINLGNGN VVEMTPNMVT RFFSSKRKWI AVKEIYDFLD HRVPHAEFIC RSSEKDLALV  840
FKPRGCKSKP ANCEQLVEAL MYVTKALVAL HDLSFMHRHL SWDKVMRRSD GEGEWFICGF  900
DDATGAPQIN PHGGSVGAGG GGEARGPHAP EMVGRGLHGV KVDVWGVGYL VKTCGLTSSG  960
LPKMLRDLQS RCLDPNPEHR PTAADCYHHL LQLQSSLSAA GGGGTGGGY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018720288.10.0PREDICTED: uncharacterized protein LOC104426950
TrEMBLA0A058ZY720.0A0A058ZY72_EUCGR; Uncharacterized protein
STRINGXP_010038420.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM83561624
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-07Trihelix family protein